3GGE | pdb_00003gge

Crystal structure of the PDZ domain of PDZ domain-containing protein GIPC2

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	IRS	e3ggeC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: IRS	ECOD (v294.1)
B	IRS	e3ggeB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: IRS	ECOD (v294.1)
A	Glyco_hydro_2_C	e3ggeA1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: Glyco_hydro_2_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)
B	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)
A	2.30.42.10	Mainly Beta	Roll	Pdz3 Domain	PDZ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF00595	PDZ domain (PDZ)	PDZ domain	PDZ domains are found in diverse signaling proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	PDZ domain-containing protein GIPC2	identical protein binding protein binding binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR055349	GIPC, GH2	Domain
A, B, C	IPR017379	PDZ domain-containing protein GIPC1/2/3	Family
A, B, C	IPR001478	PDZ domain	Domain
A, B, C	IPR036034	PDZ superfamily	Homologous Superfamily
A, B, C	IPR056814	GIPC1-3, GH1 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C	Pharos: Q8TF65	lung carcinoma lung adenocarcinoma adrenal cortex carcinoma cutaneous lupus erythematosus esophageal adenocarcinoma lung cancer nephrosclerosis ovarian cancer swine influenza breast cancer cystic fibrosis invasive ductal breast carcinoma non-small cell lung carcinoma pituitary cancer ulcerative colitis lung carcinoma lung adenocarcinoma adrenal cortex carcinoma cutaneous lupus erythematosus esophageal adenocarcinoma lung cancer nephrosclerosis ovarian cancer swine influenza breast cancer cystic fibrosis invasive ductal breast carcinoma non-small cell lung carcinoma pituitary cancer ulcerative colitis Crohn disease ductal breast carcinoma in situ malignant mesothelioma osteosarcoma psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.