3FIP | pdb_00003fip

Crystal structure of Usher PapC translocation pore

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BtRNA-synt_Hise3fipB1 A: a/b three-layered sandwichesX: YrdC/RibBH: SH3T: SH3F: tRNA-synt_HisECOD (v294.1)
AUshere3fipA1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: UsherECOD (v294.1)
ARieskee3fipA2 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: RieskeECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Outer membrane usher protein papC

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR042186Outer membrane usher protein FimD, plug domainHomologous Superfamily
A, B
IPR037224PapC, N-terminal domain superfamilyHomologous Superfamily
A, B
IPR018030Fimbrial membrane usher, conserved siteConserved Site
A, B
IPR025885PapC, N-terminal domainDomain
A, B
IPR043142PapC-like, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR025949PapC-like, C-terminal domainDomain
A, B
IPR000015Outer membrane usher proteinFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELBeta-Barrel Membrane Proteins: Monomeric/DimericP pilus usher translocation domain, PapC146-637