3DNF
Structure of (E)-4-Hydroxy-3-methyl-but-2-enyl Diphosphate Reductase, the Terminal Enzyme of the Non-Mevalonate Pathway
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3dnfa_ | Alpha and beta proteins (a/b) | LytB-like | LytB-like | LytB-like | LytB | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
B | d3dnfb_ | Alpha and beta proteins (a/b) | LytB-like | LytB-like | LytB-like | LytB | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02401 | e3dnfA2 | A: a/b three-layered sandwiches | X: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase (From Topology) | H: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase (From Topology) | T: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase | F: PF02401 | ECOD (1.6) |
B | PF02401 | e3dnfB4 | A: a/b three-layered sandwiches | X: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase (From Topology) | H: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase (From Topology) | T: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase | F: PF02401 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1010.20 | Alpha Beta | 3-Layer(aba) Sandwich | Cobalt-precorrin-4 Transmethylase | domain 1 | CATH (4.3.0) |
A | 3.40.50.11270 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.1010.20 | Alpha Beta | 3-Layer(aba) Sandwich | Cobalt-precorrin-4 Transmethylase | domain 1 | CATH (4.3.0) |
B | 3.40.50.11270 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02401 | LytB protein (LYTB) | LytB protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003451 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | Family |