CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | NGO1945 N-terminal domain-like | 8045666 | 4004603 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | PqqD-like | 8091377 | 4005476 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | NGO1945 N-terminal domain-like | 8091376 | 3002500 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Winged helix DNA-binding domain | 8091378 | 3000034 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DUF2063 | e3deeA1 | A: a/b three-layered sandwiches | X: Pfam family PF09836 N-terminal domain | H: Pfam family PF09836 N-terminal domain | T: Pfam family PF09836 N-terminal domain | F: DUF2063 | ECOD (v294.1) |
| A | DHHA1 | e3deeA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: DHHA1 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.150.690 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
| A | 3.90.930.50 | Alpha Beta | Alpha-Beta Complex | Outer Surface Protein A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22106 | NGO1945 C-terminal domain (NGO1945_C) | NGO1945 C-terminal domain | This domain represents the C-terminal part of a Neisseria protein, Swiss:Q5F5I0, PDB:3dee. It runs from residues 135-220 including a beta sheet containing three antiparallel beta strands and three alpha helices. From genomic context and the fold of t ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR044922 | DUF2063, N-terminal superfamily | Homologous Superfamily | |
| IPR054098 | HvfC, C-terminal domain | Domain | |
| IPR018640 | HvfC, N-terminal domain | Domain |














