3B2D | pdb_00003b2d

Crystal structure of human RP105/MD-1 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De3b2dD1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: UCH_NF:ECOD (20:10:01)
Ce3b2dC1 A: OB-foldX: Bet v1-likeH: Bet v1-likeT: MATH_2F:ECOD (20:10:01)
Ae3b2dA1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: IMSF:ECOD (20:10:01)
Be3b2dB1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: UCH_NF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.770 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
C2.60.40.770 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF02221ML domain (E1_DerP2_DerF2)ML domainML domain - MD-2-related lipid recognition domain. This family consists of proteins from plants, animals and fungi, including dust mite allergen Der P 2 (Swiss:P49278). It has been implicate in lipid recognition, particularly in the recognition of pa ...ML domain - MD-2-related lipid recognition domain. This family consists of proteins from plants, animals and fungi, including dust mite allergen Der P 2 (Swiss:P49278). It has been implicate in lipid recognition, particularly in the recognition of pathogen related products. A mutation in Npc2 (Swiss:Q15668) causes a rare form of Niemann-Pick type C2 disease. This domain has a similar topology to immunoglobulin domains.
Domain
A, B
PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
A, B
PF18831Leucine-rich repeat (LRR_11)Leucine-rich repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Lymphocyte antigen 86-
A, B
CD180 antigen