3ZYG | pdb_00003zyg

NETRING2 LAM AND EGF1 DOMAINS

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Ephrin_lbd	e3zygB5	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Ephrin_lbd	ECOD (v294.1)
A	Laminin_EGF	e3zygA1	A: a/b three-layered sandwiches	X: RuvA-C	H: Hypothetical protein MTH1615	T: Hypothetical protein MTH1615	F: Laminin_EGF	ECOD (v294.1)
A	PsbH	e3zygA2	A: a/b three-layered sandwiches	X: RuvA-C	H: Hypothetical protein MTH1615	T: Hypothetical protein MTH1615	F: PsbH	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.10.25.10	Mainly Beta	Ribbon	Laminin	Laminin	CATH (4.3.0)
B	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
A	2.10.25.10	Mainly Beta	Ribbon	Laminin	Laminin	CATH (4.3.0)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00053	Laminin EGF domain (EGF_laminin)	Laminin EGF domain	This family is like Pfam:PF00008 but has 8 conserved cysteines instead of six.	Domain
A, B	PF00055	Laminin N-terminal (Domain VI) (Laminin_N)	Laminin N-terminal (Domain VI)		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	NETRIN-G2	-	trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication cellular process developmental process multicellular organismal process postsynapse organization organelle assembly postsynaptic specialization assembly postsynapse assembly nervous system development cellular component organization cellular component biogenesis multicellular organism development organelle organization cell junction organization cellular component assembly cell junction assembly anatomical structure development synapse organization cellular component organization or biogenesis postsynaptic specialization organization synapse assembly system development cell adhesion cell-cell adhesion synaptic membrane adhesion regulation of cellular component organization regulation of developmental process cellular developmental process regulation of neuron projection arborization cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis regulation of cell morphogenesis neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation regulation of anatomical structure morphogenesis plasma membrane bounded cell projection organization regulation of cell projection organization generation of neurons anatomical structure morphogenesis neuron projection arborization neuron development regulation of presynapse assembly regulation of presynapse organization regulation of synapse structure or activity regulation of synapse assembly regulation of biological quality presynapse organization regulation of cellular component biogenesis regulation of cell junction assembly regulation of synapse organization presynapse assembly regulation of neuron projection development regulation of plasma membrane bounded cell projection organization regulation of cell motility neuron migration regulation of neuron migration regulation of locomotion regulation of cell migration cell migration cell motility locomotion axonogenesis axon development cell morphogenesis involved in neuron differentiation	cellular anatomical structure membrane side of membrane extracellular region Schaffer collateral - CA1 synapse synapse cell junction cell periphery plasma membrane axon cell projection neuron projection plasma membrane bounded cell projection glutamatergic synapse cellular anatomical structure membrane side of membrane extracellular region Schaffer collateral - CA1 synapse synapse cell junction cell periphery plasma membrane axon cell projection neuron projection plasma membrane bounded cell projection glutamatergic synapse presynaptic active zone membrane presynaptic membrane synaptic membrane presynapse plasma membrane region presynaptic active zone

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008211	Laminin, N-terminal	Domain
A, B	IPR056863	Laminin/attractin/netrin-like, EGF domain	Domain
A, B	IPR050440	Laminin/Netrin Extracellular Matrix	Family
A, B	IPR002049	Laminin-type EGF domain	Domain
A, B	IPR000742	EGF-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q96CW9	bipolar disorder schizophrenia attention deficit hyperactivity disorder, inattentive type glioblastoma Manic primitive neuroectodermal tumor malignant ependymoma malignant glioma osteosarcoma tuberculosis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.