3ZNU | pdb_00003znu

Crystal structure of ClcF in crystal form 2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J	d3znuj_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
I	d3znui_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
H	d3znuh_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
G	d3znug_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
F	d3znuf_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
E	d3znue_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
D	d3znud_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
C	d3znuc_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
B	d3znub_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)
A	d3znua_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	automated matches	automated matches	(Rhodococcus opacus ) [TaxId: 37919 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Dimeric alpha+beta barrel	8070049	3000089	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	RRM_1	e3znuJ1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
I	RRM_1	e3znuI1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
H	RRM_1	e3znuH1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
G	RRM_1	e3znuG1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
F	RRM_1	e3znuF1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
E	RRM_1	e3znuE1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
D	RRM_1	e3znuD1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
C	RRM_1	e3znuC1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
B	RRM_1	e3znuB1	A: alpha bundles	X: beta-Grasp	H: HTH	T: winged helix domain	F: RRM_1	ECOD (develop294)
A	C1-set	e3znuA1	A: alpha bundles	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: C1-set	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
I	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
H	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
G	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
F	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
E	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
D	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
C	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
B	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)
A	3.30.70.1060	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Dimeric alpha+beta barrel	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	5-CHLOROMUCONOLACTONE DEHALOGENASE	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity muconolactone delta-isomerase activity catalytic activity	catabolic process beta-ketoadipate pathway metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR003464	Muconolactone delta-isomerase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR026029	Muconolactone isomerase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR011008	Dimeric alpha-beta barrel	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.