3ZD2 | pdb_00003zd2

THE STRUCTURE OF THE TWO N-TERMINAL DOMAINS OF COMPLEMENT FACTOR H RELATED PROTEIN 1 SHOWS FORMATION OF A NOVEL DIMERISATION INTERFACE

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sushi	e3zd2A1	A: a/b three-layered sandwiches	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: Sushi	ECOD (v294.1)
A	Ldh_1_N	e3zd2A2	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: Ldh_1_N	ECOD (v294.1)
B	Cathelicidins	e3zd2B1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: Cathelicidins	ECOD (v294.1)
B	Ldh_1_N	e3zd2B2	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: Ldh_1_N	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.10.70.10	Mainly Beta	Ribbon	Complement Module	domain 1	CATH (4.3.0)
B	2.10.70.10	Mainly Beta	Ribbon	Complement Module	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00084	Sushi repeat (SCR repeat) (Sushi)	Sushi repeat (SCR repeat)		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	COMPLEMENT FACTOR H-RELATED PROTEIN 1	opsonin binding protein binding binding complement component C3b binding complement binding identical protein binding	regulation of protein binding regulation of molecular function negative regulation of protein binding regulation of binding negative regulation of binding biological regulation negative regulation of molecular function humoral immune response regulation of biological process response to stimulus immune response positive regulation of biological process immune effector process positive regulation of response to stimulus regulation of protein binding regulation of molecular function negative regulation of protein binding regulation of binding negative regulation of binding biological regulation negative regulation of molecular function humoral immune response regulation of biological process response to stimulus immune response positive regulation of biological process immune effector process positive regulation of response to stimulus complement activation positive regulation of immune response regulation of response to stimulus immune system process regulation of immune response regulation of immune system process positive regulation of immune system process activation of immune response	cellular anatomical structure extracellular region blood microparticle protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR051503	Complement System Regulators and Virion Entry Mediators	Family
A, B	IPR000436	Sushi/SCR/CCP domain	Domain
A, B	IPR035976	Sushi/SCR/CCP superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q03591	IgA glomerulonephritis age related macular degeneration 1 atypical hemolytic-uremic syndrome hemolytic uremic syndrome, atypical, susceptibility to, 1 age-related macular degeneration C3 glomerulonephritis bacterial infectious disease membranoproliferative glomerulonephritis hemolytic-uremic syndrome skin disease dense deposit disease wet macular degeneration

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.