3WO8 | pdb_00003wo8

Crystal structure of the beta-N-acetylglucosaminidase from Thermotoga maritima


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGlyco_hydro_3e3wo8B1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
BEUF08613e3wo8B2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Beta-D-glucan exohydrolase, C-terminal domain (From Topology)T: Beta-D-glucan exohydrolase, C-terminal domainF: EUF08613ECOD (1.6)
AGlyco_hydro_3e3wo8A2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Glyco_hydro_3ECOD (1.6)
AEUF08613e3wo8A1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Beta-D-glucan exohydrolase, C-terminal domain (From Topology)T: Beta-D-glucan exohydrolase, C-terminal domainF: EUF08613ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.300 Alpha Beta Alpha-Beta Barrel TIM Barrel Glycoside hydrolase, family 3, N-terminal domainCATH (4.2.0)
A3.20.20.300 Alpha Beta Alpha-Beta Barrel TIM Barrel Glycoside hydrolase, family 3, N-terminal domainCATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21566Beta-N-acetylglucosaminidase, C-terminal domain (NagA_C)Beta-N-acetylglucosaminidase, C-terminal domainThis domain is found at the C-terminal end of Beta-N- acetylglucosaminidase from Thermotoga maritima (NagA), which hydrolyses chitooligomers into monomer beta-N-acetylglucosamine. NagA forms a dimer structure in which the monomer structure is organis ...This domain is found at the C-terminal end of Beta-N- acetylglucosaminidase from Thermotoga maritima (NagA), which hydrolyses chitooligomers into monomer beta-N-acetylglucosamine. NagA forms a dimer structure in which the monomer structure is organised into an N- and a C-terminal domain (Pfam:PF00933 and this entry, respectively). This domain shows an alpha-beta- alpha-sandwich fold, which comprises six beta-strands with two alpha-helices on either side of the sheet [1,2].
Domain