3WIM
GABARAP-LIR peptide complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ubiquitin-like | 8040431 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02991 | Autophagy protein Atg8 ubiquitin like (ATG8) | Autophagy protein Atg8 ubiquitin like | Light chain 3 is proposed to function primarily as a subunit of microtubule associated proteins 1A and 1B and that its expression may regulate microtubule binding activity [1]. Autophagy is generally known as a process involved in the degradation of ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004241 | Autophagy protein Atg8 ubiquitin-like | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR017455 | Zinc finger, FYVE-related | Domain | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR000306 | FYVE zinc finger | Domain | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR000409 | BEACH domain | Domain | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR001680 | WD40 repeat | Repeat | |
IPR036372 | BEACH domain superfamily | Homologous Superfamily | |
IPR023362 | PH-BEACH domain | Domain |