Crystal structure of the C-terminal domain of Themus thermophilus LitR in complex with cobalamin
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | B12-binding_2 | e3whpA2 | A: alpha arrays | X: Methionine synthase domain-like (From Topology) | H: Methionine synthase domain-like (From Topology) | T: Methionine synthase domain-like | F: B12-binding_2 | ECOD (1.6) |
| A | B12-binding | e3whpA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: B12-binding | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.1240.10 | Mainly Alpha | Orthogonal Bundle | Methyltransferase, Methionine Synthase (B12-binding Domains) | Chain A, domain 1 | CATH (4.3.0) |
| A | 3.40.50.280 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Cobalamin-binding domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Probable transcriptional regulator | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003759 | Cobalamin (vitamin B12)-binding module, cap domain | Domain | |
| IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
| IPR036724 | Cobalamin-binding domain superfamily | Homologous Superfamily | |
| IPR047057 | MerR transcriptional regulator | Family | |
| IPR006158 | Cobalamin (vitamin B12)-binding domain | Domain | |
| IPR036594 | Methionine synthase domain | Homologous Superfamily | |
| IPR000551 | MerR-type HTH domain | Domain |














