3WAJ
Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) complex with Zn and sulfate
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | archaeo_STT3_2nd | e3wajA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domains in STT3 (From Topology) | T: Ig-like domains in STT3 | F: archaeo_STT3_2nd | ECOD (1.6) |
A | PMT_2 | e3wajA5 | A: alpha bundles | X: STT3/PglB/AglB transmembrane domain (From Topology) | H: STT3/PglB/AglB transmembrane domain (From Topology) | T: STT3/PglB/AglB transmembrane domain | F: PMT_2 | ECOD (1.6) |
A | archaeo_STT3_1st | e3wajA1 | A: a/b three-layered sandwiches | X: STT3/PglB/AglB core domain (From Topology) | H: STT3/PglB/AglB core domain (From Topology) | T: STT3/PglB/AglB core domain | F: archaeo_STT3_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.12610 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 1.20.58.1650 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
A | 2.60.40.3390 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02516 | Oligosaccharyl transferase STT3, N-terminal (STT3) | Oligosaccharyl transferase STT3, N-terminal | This entry consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity [2]. In eukaryotes, OTase transfers a l ... | Domain | |
PF18079 | Archaeal glycosylation protein B long peripheral domain (AglB_L1) | Archaeal glycosylation protein B long peripheral domain | This domain is found in Archaeal Glycosylation B protein (AglB-Long) in A. fulgidus. When the domain, known as peripheral l (Pl), is combined with the central core (CC) and insertion (IS) sub-units, they form the C-terminal domain. It is thought that ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Glycosyl transferase GT-C superfamily | Oligosaccharyltransferase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Oligosaccharyltransferases (OST) | AglB OST with bound zinc & sulfate (C2 space group) |