Crystal structure of mouse Endonuclease VIII-LIKE 3 (mNEIL3)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Fapy_DNA_glyco | e3w0fA7 | A: beta barrels | X: MutM N-terminal domain-like | H: N-terminal domain of MutM-like DNA repair proteins (From Topology) | T: N-terminal domain of MutM-like DNA repair proteins | F: Fapy_DNA_glyco | ECOD (1.6) |
| A | H2TH | e3w0fA6 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: H2TH | ECOD (1.6) |
| A | zf-FPG_IleRS | e3w0fA8 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: C-terminal, Zn-finger domain of MutM-like DNA repair proteins (From Topology) | T: C-terminal, Zn-finger domain of MutM-like DNA repair proteins | F: zf-FPG_IleRS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.190.10 | Alpha Beta | Alpha-Beta Barrel | N-terminal domain of MutM-like DNA repair proteins | MutM-like, N-terminal | CATH (4.3.0) |
| A | 1.10.8.50 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF06831 | Formamidopyrimidine-DNA glycosylase H2TH domain (H2TH) | Formamidopyrimidine-DNA glycosylase H2TH domain | Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the central domain containing the DNA-binding helix-two turn-helix domain [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036443 | Zinc finger, RanBP2-type superfamily | Homologous Superfamily | |
| IPR000214 | Zinc finger, DNA glycosylase/AP lyase-type | Domain | |
| IPR015887 | DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site | Binding Site | |
| IPR012319 | Formamidopyrimidine-DNA glycosylase, catalytic domain | Domain | |
| IPR015886 | Formamidopyrimidine-DNA glycosylase, H2TH DNA-binding | Domain | |
| IPR010666 | Zinc finger, GRF-type | Domain | |
| IPR035937 | Formamidopyrimidine-DNA glycosylase, N-terminal | Homologous Superfamily | |
| IPR001876 | Zinc finger, RanBP2-type | Domain | |
| IPR010979 | Small ribosomal subunit protein uS13-like, H2TH | Homologous Superfamily |














