Crystal structure of penicillin-binding protein 3 (PBP3) from methicilin-resistant Staphylococcus aureus in the apo form.
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Methyltr_RsmB-F | e3vskB3 | A: alpha arrays | X: POZ domain | H: POZ domain | T: POZ domain | F: Methyltr_RsmB-F | ECOD (v295.2) |
| A | Transpeptidase | e3vskA1 | A: alpha arrays | X: DEATH domain | H: omega toxin-related | T: Scorpion toxin-like | F: Transpeptidase | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.90.1310.10 | Alpha Beta | Alpha-Beta Complex | Penicillin-binding protein 2a (Domain 2) | Penicillin-binding protein 2a (Domain 2) | CATH (4.3.0) |
| B | 1.10.10.1230 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain | CATH (4.3.0) |
| B | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (4.3.0) |
| A | 3.90.1310.10 | Alpha Beta | Alpha-Beta Complex | Penicillin-binding protein 2a (Domain 2) | Penicillin-binding protein 2a (Domain 2) | CATH (4.3.0) |
| A | 1.10.10.1230 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain | CATH (4.3.0) |
| A | 3.40.710.10 | Alpha Beta | 3-Layer(aba) Sandwich | Beta-lactamase | DD-peptidase/beta-lactamase superfamily | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
| IPR005311 | Penicillin-binding protein, dimerisation domain | Domain | |
| IPR001460 | Penicillin-binding protein, transpeptidase | Domain | |
| IPR050515 | Class D beta-lactamase/transpeptidase | Family | |
| IPR036138 | Penicillin-binding protein, dimerisation domain superfamily | Homologous Superfamily |














