3VN5
Crystal structure of Aquifex aeolicus RNase H3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | RNase HIII associated domain | 8052566 | 4005429 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Ribonuclease H-like | 8052578 | 4000541 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TT1751-like | 8052577 | 3001862 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribonuclease H-like | 8052579 | 3000143 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DUF3378 | e3vn5A2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: DUF3378 | ECOD (1.6) |
A | RNase_HII | e3vn5A1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: RNase_HII | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.310.10 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | TATA-Binding Protein | CATH (4.3.0) |
A | 3.30.420.10 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01351 | Ribonuclease HII (RNase_HII) | Ribonuclease HII | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR024568 | Ribonuclease HIII, N-terminal | Domain | |
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR004641 | Ribonuclease HIII | Family | |
IPR024567 | Ribonuclease HII/HIII domain | Domain | |
IPR001352 | Ribonuclease HII/HIII | Family | |
IPR012295 | TBP domain superfamily | Homologous Superfamily | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |