3VIV | pdb_00003viv

1510-N membrane-bound stomatin-specific protease K138A mutant in complex with a substrate peptide

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3vivB2 A: DEATH domainX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: HSCB_CF:ECOD (20:10:01)
Ae3vivA1 A: P-loop domains-likeX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinaseT: Hexapep,MacF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
A3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PH STOMATIN PH1511- -
A, B
441aa long hypothetical nfeD protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036013Band 7/SPFH domain superfamilyHomologous Superfamily
IPR043202Band-7 stomatin-likeFamily
IPR001972Stomatin/HflK familyFamily
IPR001107Band 7 domainDomain
IPR018080Band 7/stomatin-like, conserved siteConserved Site
A, B
IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
A, B
IPR002810NfeD-like, C-terminal domainDomain
A, B
IPR056738NfeD1b, N-terminal domainDomain
A, B
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
A, B
IPR033853Archaeal protein PH0471, N-terminalDomain
A, B
IPR052165Membrane-associated protease and related proteinsFamily
A, B
IPR056739NfeD, integral membrane domainDomain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C
OPMTransmembraneAlpha-helical polytopicClpP/Crotonase, transmembraneClpP protease