3VEB
Crystal Structure of Matp-matS
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | MatP N-terminal domain-like | 8106458 | 3002857 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Ribbon-helix-helix | 8106459 | 3000295 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2B Superfamily | Ribbon-helix-helix | 8106459 | 3000295 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2B Superfamily | MatP N-terminal domain-like | 8106458 | 3002857 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF17414 | e3vebB2 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF17414 | ECOD (1.6) |
A [auth B] | PF06303 | e3vebB1 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: PF06303 | ECOD (1.6) |
D [auth A] | PF17414 | e3vebA2 | A: alpha arrays | X: HTH | H: HTH | T: Ribbon-helix-helix | F: PF17414 | ECOD (1.6) |
D [auth A] | PF06303 | e3vebA3 | A: alpha arrays | X: Macrodomain Ter protein MatP (From Topology) | H: Macrodomain Ter protein MatP (From Topology) | T: Macrodomain Ter protein MatP | F: PF06303 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 1.20.1270.380 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
A [auth B] | 1.10.1220.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant | Met repressor-like | CATH (4.3.0) |
D [auth A] | 1.20.1270.380 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (4.3.0) |
D [auth A] | 1.10.1220.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant | Met repressor-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], D [auth A] | PF17414 | MatP C-terminal ribbon-helix-helix domain (MatP_C) | MatP C-terminal ribbon-helix-helix domain | This family, many of whose members are YcbG, organises the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. Org ... | Domain |
A [auth B], D [auth A] | PF06303 | MatP N-terminal domain (MatP) | MatP N-terminal domain | This family, many of whose members are YcbG, organises the macrodomain Ter of the chromosome of bacteria such as E coli. In these bacteria, insulated macrodomains influence the segregation of sister chromatids and the mobility of chromosomal DNA. Org ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], D [auth A] | IPR013321 | Arc-type ribbon-helix-helix | Homologous Superfamily |
A [auth B], D [auth A] | IPR009390 | Macrodomain Ter protein, MatP | Family |
A [auth B], D [auth A] | IPR035375 | MatP, C-terminal ribbon-helix-helix domain | Domain |
A [auth B], D [auth A] | IPR038339 | MatP, N-terminal domain superfamily | Homologous Superfamily |
A [auth B], D [auth A] | IPR035087 | MatP, N-terminal | Domain |