Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CEUF07926e3uqzC1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: EUF07926ECOD (1.6)
CDNA_processg_Ae3uqzC2 A: a/b three-layered sandwichesX: MCP/YpsA-related (From Topology)H: MCP/YpsA-related (From Topology)T: MCP/YpsA-relatedF: DNA_processg_AECOD (1.6)
BEUF07926e3uqzB1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: EUF07926ECOD (1.6)
BDNA_processg_Ae3uqzB2 A: a/b three-layered sandwichesX: MCP/YpsA-related (From Topology)H: MCP/YpsA-related (From Topology)T: MCP/YpsA-relatedF: DNA_processg_AECOD (1.6)
AEUF07926e3uqzA2 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: EUF07926ECOD (1.6)
ADNA_processg_Ae3uqzA3 A: a/b three-layered sandwichesX: MCP/YpsA-related (From Topology)H: MCP/YpsA-related (From Topology)T: MCP/YpsA-relatedF: DNA_processg_AECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.50.450 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
B3.40.50.450 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
A3.40.50.450 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF02481DNA recombination-mediator protein A (DNA_processg_A)DNA recombination-mediator protein AThe SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation [1]. It has now been shown that DprA is found to bind cooperatively to single-strand ...The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation [1]. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyse the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation [2].
Domain
A, B, C
PF18255DNA processing protein A sterile alpha motif domain (SAM_DprA)DNA processing protein A sterile alpha motif domainThis is the N-terminal domain found in DNA processing protein A (DprA) present in Streptococcus pneumoniae. DprA has recently been discovered to be a transformation-dedicated RecA loader. Transformation is believed to play a major role in genetic pla ...This is the N-terminal domain found in DNA processing protein A (DprA) present in Streptococcus pneumoniae. DprA has recently been discovered to be a transformation-dedicated RecA loader. Transformation is believed to play a major role in genetic plasticity. This domain is known as the sterile alpha motif (SAM) domain. DprAs are able to form a type of dimer through SAM-SAM interactions, also known as N/N interactions [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
DNA processing protein DprA- -