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Structure of dihydrodipicolinate synthase from the common grapevine


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyClass I aldolase 8059150 4003216 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAldolase 8059151 3000445 SCOP2 (2022-06-29)
FSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAldolase 8059151 3000445 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFapy_DNA_glycoe3tuuA1 A: alpha arraysX: Flavodoxin-likeH: SH3T: SH3F: Fapy_DNA_glycoECOD (v295.2)
FPI3K_C2e3tuuF2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
HPI3K_C2e3tuuH2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
GPI3K_C2e3tuuG2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
EPI3K_C2e3tuuE2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
DPI3K_C2e3tuuD2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
CPI3K_C2e3tuuC2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)
BPI3K_C2e3tuuB2 A: alpha arraysX: HTHH: HTHT: winged helix domainF: PI3K_C2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
F3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
H3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
G3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
E3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
D3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
B3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00701Dihydrodipicolinate synthetase family (DHDPS)Dihydrodipicolinate synthetase familyThis family has a TIM barrel structure. Domain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D, E
KPI Parent Component: LYS

:  AA0287

:  N6-pyruvic acid 2-iminyl-L-lysine MOD:00292