3TEK | pdb_00003tek

ThermoDBP: a non-canonical single-stranded DNA binding protein with a novel structure and mechanism

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyThermoDBP N-terminal DNA-binding domain-like 8055798 4007336 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055799 3002315 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyThermoDBP N-terminal DNA-binding domain-like 8055799 3002315 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AThermoDBPe3tekA1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: ThermoDBPECOD (1.6)
BThermoDBPe3tekB1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: ssDNA-binding protein ThermoDBP-related (From Topology)T: ssDNA-binding protein ThermoDBP-relatedF: ThermoDBPECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.470.50 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)
B3.30.470.50 Alpha Beta 2-Layer Sandwich D-amino Acid Aminotransferase Chain A, domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ThermoDBP-single stranded DNA binding protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR033787ssDNA-binding protein ThermoDBPDomain