3SUB | pdb_00003sub

Crystal structure of the catalytic domain of Plasmodium falciparum ARF GTPase activating protein

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UCH_N	e3subB1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: UCH_N	ECOD (v294.1)
A	Lipocalin	e3subA1	A: a/b three-layered sandwiches	X: Baculovirus p35 protein-related	H: Bet v1-like	T: Bet v1-like	F: Lipocalin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.220.150	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
A	1.10.220.150	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01412	Putative GTPase activating protein for Arf (ArfGap)	Putative GTPase activating protein for Arf	Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ADP-ribosylation factor GTPase-activating protein	DNA binding binding nucleic acid binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding transition metal ion binding zinc ion binding ion binding DNA binding binding nucleic acid binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	establishment of organelle localization vesicle budding from membrane cellular localization transport Golgi vesicle budding vesicle targeting, to, from or within Golgi vesicle-mediated transport vesicle targeting COPI-coated vesicle budding cellular component organization vesicle organization localization organelle localization establishment of localization in cell establishment of organelle localization vesicle budding from membrane cellular localization transport Golgi vesicle budding vesicle targeting, to, from or within Golgi vesicle-mediated transport vesicle targeting COPI-coated vesicle budding cellular component organization vesicle organization localization organelle localization establishment of localization in cell vesicle coating cellular component organization or biogenesis membrane organization vesicle localization establishment of vesicle localization establishment of localization organelle organization COPI coating of Golgi vesicle cellular process Golgi transport vesicle coating Golgi vesicle transport	membrane-bounded organelle Golgi membrane intracellular anatomical structure Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR037278	ARFGAP/RecO-like zinc finger	Homologous Superfamily
A, B	IPR001164	Arf GTPase activating protein	Domain
A, B	IPR038508	ArfGAP domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.