3SOT | pdb_00003sot

Crystal structure of a Multidomain protein including DUF1735 (BACOVA_03322) from Bacteroides ovatus at 2.80 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2 Family	BT3507 N-terminal domain-like	8045394	4004454	SCOP2 (2022-06-29)
E	SCOP2 Family	BT3507 C-terminal domain-like	8049793	4006642	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	E set domains	8090506	3000070	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	BT3507 C-terminal domain-like	8090507	3002441	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	MoCoBD_2	e3sotF1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Hemagglutinin HA2 chain	T: Hemagglutinin HA2 chain	F: MoCoBD_2	ECOD (v294.1)
E	FeoB_Cyto	e3sotE1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: FeoB_Cyto	ECOD (v294.1)
E	Nuc_deoxyrib_tr	e3sotE3	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Nuc_deoxyrib_tr	ECOD (v294.1)
D	FeoB_Cyto	e3sotD1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: FeoB_Cyto	ECOD (v294.1)
D	Nuc_deoxyrib_tr	e3sotD3	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Nuc_deoxyrib_tr	ECOD (v294.1)
C	FeoB_Cyto	e3sotC1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: FeoB_Cyto	ECOD (v294.1)
C	Nuc_deoxyrib_tr	e3sotC3	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Nuc_deoxyrib_tr	ECOD (v294.1)
B	FeoB_Cyto	e3sotB1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: FeoB_Cyto	ECOD (v294.1)
B	Nuc_deoxyrib_tr	e3sotB3	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Nuc_deoxyrib_tr	ECOD (v294.1)
A	VEGFR-1-like_Ig-like	e3sotA5	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: VEGFR-1-like_Ig-like	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)
E	2.60.40.1740	Mainly Beta	Sandwich	Immunoglobulin-like	hypothetical protein (bacova_03559)	CATH (4.3.0)
E	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)
D	2.60.40.1740	Mainly Beta	Sandwich	Immunoglobulin-like	hypothetical protein (bacova_03559)	CATH (4.3.0)
D	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)
C	2.60.40.1740	Mainly Beta	Sandwich	Immunoglobulin-like	hypothetical protein (bacova_03559)	CATH (4.3.0)
C	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)
B	2.60.40.1740	Mainly Beta	Sandwich	Immunoglobulin-like	hypothetical protein (bacova_03559)	CATH (4.3.0)
B	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)
A	2.60.40.1740	Mainly Beta	Sandwich	Immunoglobulin-like	hypothetical protein (bacova_03559)	CATH (4.3.0)
A	2.40.128.440	Mainly Beta	Beta Barrel	Lipocalin	Uncharacterised protein PF14274, DUF4361	CATH (4.3.0)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.