3SK7 | pdb_00003sk7

Crystal Structure of V. cholerae SeqA

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3sk7b1 Alpha and beta proteins (a+b) Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domain automated matches (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], SCOPe (2.08)
Bd3sk7b2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], SCOPe (2.08)
Ad3sk7a1 Alpha and beta proteins (a+b) Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domain automated matches (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], SCOPe (2.08)
Ad3sk7a2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSeqAe3sk7B1 A: alpha arraysX: DEATH domainH: Replication modulator SeqA-C (From Topology)T: Replication modulator SeqA-CF: SeqAECOD (1.6)
ASeqAe3sk7A1 A: alpha arraysX: DEATH domainH: Replication modulator SeqA-C (From Topology)T: Replication modulator SeqA-CF: SeqAECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.1380.10 Mainly Alpha Up-down Bundle Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domainCATH (4.2.0)
A1.20.1380.10 Mainly Alpha Up-down Bundle Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domainCATH (4.2.0)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
FME Parent Component: MET

RESID:  AA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891