3SJA | pdb_00003sja

Crystal structure of S. cerevisiae Get3 in the open state in complex with Get1 cytosolic domain

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	Get1 cytosolic domain-like	8092327	3002588	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Get1 cytosolic domain-like	8092327	3002588	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Get1 cytosolic domain-like	8092327	3002588	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Get1 cytosolic domain-like	8092327	3002588	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Get1 cytosolic domain-like	8092327	3002588	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Simibi-like P-loop NTPases	8017940	3002018	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Simibi-like P-loop NTPases	8017940	3002018	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Simibi-like P-loop NTPases	8017940	3002018	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Simibi-like P-loop NTPases	8017940	3002018	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Simibi-like P-loop NTPases	8017940	3002018	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	Pyrid_oxidase_2	e3sjaJ1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: Pyrid_oxidase_2	ECOD (v294.1)
H	Pyrid_oxidase_2	e3sjaH1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: Pyrid_oxidase_2	ECOD (v294.1)
G	Pyrid_oxidase_2	e3sjaG1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: Pyrid_oxidase_2	ECOD (v294.1)
D	Pyrid_oxidase_2	e3sjaD1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: Pyrid_oxidase_2	ECOD (v294.1)
C	rve	e3sjaC1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)
I	rve	e3sjaI1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)
F	rve	e3sjaF1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)
E	rve	e3sjaE1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)
B	rve	e3sjaB1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)
A	rve	e3sjaA1	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: rve	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	1.10.287.660	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
H	1.10.287.660	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
G	1.10.287.660	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
D	1.10.287.660	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
C	1.10.287.660	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
I	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
F	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
E	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C, D, G, H, J	PF04420	CHD5-like protein (CHD5)	CHD5-like protein	-	Family
A, B, E, F, I	PF02374	Anion-transporting ATPase (ArsA_ATPase)	Anion-transporting ATPase	This Pfam family represents a conserved domain, which is sometimes repeated, in an anion-transporting ATPase. The ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D, G, H, J	Golgi to ER traffic protein 1	protein-membrane adaptor activity protein-macromolecule adaptor activity molecular adaptor activity macromolecule transmembrane transporter activity protein transporter activity transmembrane protein transporter activity transporter activity transmembrane transporter activity	localization transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum cellular process establishment of localization Golgi vesicle transport vesicle-mediated transport establishment of protein localization cellular localization establishment of protein localization to organelle establishment of protein localization to membrane establishment of protein localization to endoplasmic reticulum membrane localization within membrane establishment of protein localization to endoplasmic reticulum localization transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum cellular process establishment of localization Golgi vesicle transport vesicle-mediated transport establishment of protein localization cellular localization establishment of protein localization to organelle establishment of protein localization to membrane establishment of protein localization to endoplasmic reticulum membrane localization within membrane establishment of protein localization to endoplasmic reticulum membrane organization endoplasmic reticulum organization cellular component organization organelle organization protein localization to organelle macromolecule localization intracellular protein localization cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization tail-anchored membrane protein insertion into ER membrane mitophagy catabolic process macroautophagy autophagy metabolic process autophagy of mitochondrion process utilizing autophagic mechanism	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex endomembrane system GET complex endoplasmic reticulum endoplasmic reticulum protein-containing complex Golgi membrane membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex endomembrane system GET complex endoplasmic reticulum endoplasmic reticulum protein-containing complex Golgi membrane Golgi apparatus membrane bounding membrane of organelle organelle membrane mitochondrial membrane organelle envelope mitochondrial envelope organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum membrane
A, B, E, F, I	ATPase GET3	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding unfolded protein binding protein binding GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity protein folding chaperone cation binding metal ion binding identical protein binding	membrane organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle macromolecule localization cellular process intracellular protein localization membrane organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle macromolecule localization cellular process intracellular protein localization cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization tail-anchored membrane protein insertion into ER membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane protein targeting to membrane establishment of protein localization to organelle establishment of protein localization to endoplasmic reticulum protein targeting to ER response to stimulus response to metal ion response to chemical cellular response to stimulus response to oxidative stress cellular response to chemical stimulus cellular response to stress response to stress cellular response to oxidative stress cellular response to chemical stress transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Golgi vesicle transport vesicle-mediated transport regulation of cellular process sexual reproduction signaling regulation of reproductive process reproductive process positive regulation of biological process regulation of conjugation with cellular fusion response to pheromone cellular response to pheromone cell communication positive regulation of conjugation with cellular fusion signal transduction positive regulation of reproductive process pheromone-dependent signal transduction involved in conjugation with cellular fusion regulation of biological process signal transduction involved in positive regulation of conjugation with cellular fusion biological regulation conjugation with cellular fusion response to pheromone triggering conjugation with cellular fusion response to heat response to abiotic stimulus response to temperature stimulus response to arsenic-containing substance	membrane-bounded organelle protein-containing complex intracellular anatomical structure intracellular membrane-bounded organelle endomembrane system GET complex intracellular organelle cellular anatomical structure organelle endoplasmic reticulum cytoplasm endoplasmic reticulum protein-containing complex cytosol organelle subcompartment membrane-bounded organelle protein-containing complex intracellular anatomical structure intracellular membrane-bounded organelle endomembrane system GET complex intracellular organelle cellular anatomical structure organelle endoplasmic reticulum cytoplasm endoplasmic reticulum protein-containing complex cytosol organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane endoplasmic reticulum membrane Golgi apparatus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D, G, H, J	IPR027538	Get 1, fungi	Family
C, D, G, H, J	IPR029012	Helix hairpin bin domain superfamily	Homologous Superfamily
C, D, G, H, J	IPR028945	Get1 family	Family
A, B, E, F, I	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B, E, F, I	IPR027542	Arsenical pump ATPase, ArsA/GET3, eukaryotic	Family
A, B, E, F, I	IPR016300	Arsenical pump ATPase, ArsA/GET3	Family
A, B, E, F, I	IPR025723	ArsA/GET3, Anion-transporting ATPase-like domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
C, D, G, H, J	OPM	Monotopic/peripheral	Alpha/Beta monotopic/peripheral	P-loop containing nucleoside triphosphate hydrolases	ArsA ATPase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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