3SDR | pdb_00003sdr

Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATerpene_synth_Ce3sdrA4 A: alpha bundlesX: Terpenoid synthases (From Topology)H: Terpenoid synthases (From Topology)T: Terpenoid synthasesF: Terpene_synth_CECOD (1.6)
ATerpene_synthe3sdrA3 A: alpha superhelicesX: Repetitive alpha hairpinsH: alpha/alpha toroid (From Topology)T: alpha/alpha toroidF: Terpene_synthECOD (1.6)
ASQHop_cyclase_Ne3sdrA5 A: alpha superhelicesX: Repetitive alpha hairpinsH: alpha/alpha toroid (From Topology)T: alpha/alpha toroidF: SQHop_cyclase_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.50.10.130 Mainly Alpha Alpha/alpha barrel Glycosyltransferase Terpene synthase, N-terminal domainCATH (4.2.0)
A1.50.10.160 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.2.0)
A1.10.600.10 Mainly Alpha Orthogonal Bundle Farnesyl Diphosphate Synthase Farnesyl Diphosphate SynthaseCATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Alpha-bisabolene synthase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005630Terpene synthase, metal-binding domainDomain
IPR001906Terpene synthase, N-terminal domainDomain
IPR008949Isoprenoid synthase domain superfamilyHomologous Superfamily
IPR036965Terpene synthase, N-terminal domain superfamilyHomologous Superfamily
IPR044814Terpene cyclases, class 1, plantFamily
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidHomologous Superfamily
IPR050148Terpene synthase-likeFamily