Annotations: 3S6P

Crystal Structure of Helicoverpa Armigera Stunt Virus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth D]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8085524	3000918	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8085524	3000918	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8085524	3000918	SCOP2B (2022-06-29)
A	SCOP2 Family	Tetraviridae-like VP	8085523	4000809	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8085524	3000918	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G [auth D]	Acyl-CoA_dh_1	e3s6pD1	A: beta barrels	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Acyl-CoA_dh_1	ECOD (v294.2)
E [auth C]	Peptidase_A21	e3s6pC1	A: beta barrels	X: Insertion domain in tetravirus coat protein	H: Insertion domain in tetravirus coat protein	T: Insertion domain in tetravirus coat protein	F: Peptidase_A21	ECOD (v294.2)
E [auth C]	Rhv	e3s6pC2	A: beta barrels	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v294.2)
C [auth B]	Acyl-CoA_dh_1	e3s6pB1	A: beta barrels	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Acyl-CoA_dh_1	ECOD (v294.2)
A	Acyl-CoA_dh_1	e3s6pA1	A: beta barrels	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Acyl-CoA_dh_1	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	6.10.140.1660	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
F [auth G]	6.10.140.1660	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
G [auth D]	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
G [auth D]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
G [auth D]	2.60.270.70	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
E [auth C]	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
E [auth C]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
E [auth C]	2.60.270.70	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
C [auth B]	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
C [auth B]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C [auth B]	2.60.270.70	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
A	1.20.1690.20	Mainly Alpha	Up-down Bundle	V-type ATP synthase subunit C fold		CATH (4.3.0)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
A	2.60.270.70	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth E], D [auth F], F [auth G], H	Capsid protein	-	-	viral capsid icosahedral viral capsid T=4 icosahedral viral capsid virion component
A, C [auth B], E [auth C], G [auth D]	Capsid protein	-	-	viral capsid icosahedral viral capsid T=4 icosahedral viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth E], D [auth F], F [auth G], H	IPR029053	Viral coat protein subunit	Homologous Superfamily
B [auth E], D [auth F], F [auth G], H	IPR005313	Peptidase N2	Family
A, C [auth B], E [auth C], G [auth D]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, C [auth B], E [auth C], G [auth D]	IPR005313	Peptidase N2	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.