The CRISPR-associated Cas3 HD domain protein MJ0384 from Methanocaldococcus jannaschii
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.10.3210.30 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF18019 | Cas3, HD domain (Cas3_HD) | Cas3, HD domain | This HD domain is found at the N-terminus of Cas3 enzymes fused to a helicase domain. This domain is sometimes found as a separate protein. It acts as a nuclease that cleaves ssDNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| CAS3 Metal dependent phosphohydrolase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038257 | CRISPR-associated Cas3-type HD domain superfamily | Homologous Superfamily | |
| IPR006483 | CRISPR-associated Cas3-type, HD domain | Domain |














