3RV0
Crystal structure of K. polysporus Dcr1 without the C-terminal dsRBD
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF00636 | e3rv0C1 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
C | PF20860 | e3rv0C2 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: PF20860 | ECOD (1.6) |
A | PF00636 | e3rv0A2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
A | PF20860 | e3rv0A1 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: PF20860 | ECOD (1.6) |
B | PF00636 | e3rv0B2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
B | PF20860 | e3rv0B1 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: PF20860 | ECOD (1.6) |
B | PF00035 | e3rv0B3 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00035 | ECOD (1.6) |
D | PF00636 | e3rv0D1 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: PF00636 | ECOD (1.6) |
D | PF20860 | e3rv0D2 | A: alpha arrays | X: N-terminal domain in some Dicers (From Topology) | H: N-terminal domain in some Dicers (From Topology) | T: N-terminal domain in some Dicers | F: PF20860 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00636 | Ribonuclease III domain (Ribonuclease_3) | Ribonuclease III domain | - | Family | |
PF20860 | Dicers, N-terminal domain (Dicers_N) | Dicers, N-terminal domain | This domain is found at the N-terminal of hypothetical proteins from yeast that are thought to be the noncanonical Dicers found in these organisms. These proteins adopt a homodimer assembly similar to bacterial ribonuclease III but extended by a uniq ... | Domain | |
PF00035 | Double-stranded RNA binding motif (dsrm) | Double-stranded RNA binding motif | Sequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five d ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048505 | Dicers-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR048504 | Dicers-like, N-terminal domain | Domain | |
IPR000999 | Ribonuclease III domain | Domain | |
IPR014720 | Double-stranded RNA-binding domain | Domain | |
IPR036389 | Ribonuclease III, endonuclease domain superfamily | Homologous Superfamily |