3RMT | pdb_00003rmt

Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d3rmtc1	Alpha and beta proteins (a+b)	IF3-like	EPT/RTPC-like	automated matches	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
C	d3rmtc2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
D	d3rmtd1	Alpha and beta proteins (a+b)	IF3-like	EPT/RTPC-like	automated matches	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
D	d3rmtd2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
B	d3rmtb1	Alpha and beta proteins (a+b)	IF3-like	EPT/RTPC-like	automated matches	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
B	d3rmtb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
A	d3rmta1	Alpha and beta proteins (a+b)	IF3-like	EPT/RTPC-like	automated matches	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
A	d3rmta2	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	EPT/RTPC-like	8074710	3001530	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	EPT/RTPC-like	8074710	3001530	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	EPT/RTPC-like	8074710	3001530	SCOP2B (2022-06-29)
A	SCOP2 Family	Enolpyruvate transferase, EPT	8074709	4001425	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	EPT/RTPC-like	8074710	3001530	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	EPSP_synthase_N_1	e3rmtC2	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_N_1	ECOD (1.6)
C	EPSP_synthase_C	e3rmtC1	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_C	ECOD (1.6)
D	EPSP_synthase_N_1	e3rmtD2	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_N_1	ECOD (1.6)
D	EPSP_synthase_C	e3rmtD1	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_C	ECOD (1.6)
B	EPSP_synthase_N_1	e3rmtB1	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_N_1	ECOD (1.6)
B	EPSP_synthase_C	e3rmtB2	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_C	ECOD (1.6)
A	EPSP_synthase_N_1	e3rmtA2	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_N_1	ECOD (1.6)
A	EPSP_synthase_C	e3rmtA1	A: a+b two layers	X: IF3-like	H: EPT/RTPC-like (From Topology)	T: EPT/RTPC-like	F: EPSP_synthase_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.65.10.10	Alpha Beta	Alpha-beta prism	UDP-n-acetylglucosamine1-carboxyvinyl-transferase	Chain	CATH (4.3.0)
D	3.65.10.10	Alpha Beta	Alpha-beta prism	UDP-n-acetylglucosamine1-carboxyvinyl-transferase	Chain	CATH (4.3.0)
B	3.65.10.10	Alpha Beta	Alpha-beta prism	UDP-n-acetylglucosamine1-carboxyvinyl-transferase	Chain	CATH (4.3.0)
A	3.65.10.10	Alpha Beta	Alpha-beta prism	UDP-n-acetylglucosamine1-carboxyvinyl-transferase	Chain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) (EPSP_synthase)	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	3-phosphoshikimate 1-carboxyvinyltransferase 1	3-phosphoshikimate 1-carboxyvinyltransferase activity transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity	amino acid biosynthetic process biosynthetic process amino acid metabolic process primary metabolic process metabolic process cellular process oxoacid metabolic process small molecule biosynthetic process dicarboxylic acid metabolic process carboxylic acid metabolic process organic acid metabolic process organic acid biosynthetic process carboxylic acid biosynthetic process chorismate metabolic process amino acid biosynthetic process biosynthetic process amino acid metabolic process primary metabolic process metabolic process cellular process oxoacid metabolic process small molecule biosynthetic process dicarboxylic acid metabolic process carboxylic acid metabolic process organic acid metabolic process organic acid biosynthetic process carboxylic acid biosynthetic process chorismate metabolic process chorismate biosynthetic process small molecule metabolic process dicarboxylic acid biosynthetic process aromatic amino acid family biosynthetic process aromatic amino acid metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001986	Enolpyruvate transferase domain	Domain
A, B, C, D	IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	Homologous Superfamily
A, B, C, D	IPR036968	Enolpyruvate transferase domain superfamily	Homologous Superfamily
A, B, C, D	IPR006264	3-phosphoshikimate 1-carboxyvinyltransferase	Family
A, B, C, D	IPR023193	3-phosphoshikimate 1-carboxyvinyltransferase, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.