3RJT | pdb_00003rjt

Crystal structure of lipolytic protein G-D-S-L family from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3rjta1	Alpha and beta proteins (a/b)	Flavodoxin-like	SGNH hydrolase	automated matches	automated matches	(Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ) [TaxId: 521098 ],	SCOPe (2.08)
A	d3rjta2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ) [TaxId: 521098 ],	SCOPe (2.08)
B	d3rjtb1	Alpha and beta proteins (a/b)	Flavodoxin-like	SGNH hydrolase	automated matches	automated matches	(Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ) [TaxId: 521098 ],	SCOPe (2.08)
B	d3rjtb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ) [TaxId: 521098 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lipase_GDSL_2	e3rjtA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: Lipase_GDSL_2	ECOD (1.6)
B	Lipase_GDSL_2	e3rjtB1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: SGNH hydrolase (From Topology)	T: SGNH hydrolase	F: Lipase_GDSL_2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1110	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	SGNH hydrolase	CATH (4.3.0)
B	3.40.50.1110	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	SGNH hydrolase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF13472	GDSL-like Lipase/Acylhydrolase family (Lipase_GDSL_2)	GDSL-like Lipase/Acylhydrolase family	This family of presumed lipases and related enzymes are similar to Pfam:PF00657.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Lipolytic protein G-D-S-L family	lysophospholipase activity phosphatidylcholine lysophospholipase activity hydrolase activity, acting on ester bonds carboxylic ester hydrolase activity hydrolase activity catalytic activity phospholipase activity lipase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR013830	SGNH hydrolase-type esterase domain	Domain
A, B	IPR036514	SGNH hydrolase superfamily	Homologous Superfamily
A, B	IPR051532	Diverse Ester Hydrolysis Enzymes	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	CSO	Parent Component: CYS RESID: AA0205 PSI-MOD : L-cysteine sulfenic acid MOD:00210
A, B	MSE	Parent Component: MET RESID: AA0205

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.