3QXB | pdb_00003qxb

Crystal structure of a Putative Xylose isomerase (YP_426450.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.90 A resolution


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPkinase,Pkinase_Ce3qxbD1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
CPkinase,Pkinase_Ce3qxbC1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
BPkinase,Pkinase_Ce3qxbB1 A: alpha bundlesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Pkinase,Pkinase_CECOD (develop294)
AAP_endonuc_2e3qxbA1 A: alpha bundlesX: N-terminal beta-sandwich domain in anthrax protective antigenH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AP_endonuc_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF01261Xylose isomerase-like TIM barrel (AP_endonuc_2)Xylose isomerase-like TIM barrelThis TIM alpha/beta barrel structure is found in xylose isomerase (Swiss:P19148) and in endonuclease IV (Swiss:P12638, EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the ...This TIM alpha/beta barrel structure is found in xylose isomerase (Swiss:P19148) and in endonuclease IV (Swiss:P12638, EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Putative Xylose isomerase - -

InterPro: Protein Family Classification InterPro Database Homepage