Crystal structure of a Putative transcriptional regulator (YP_001089212.1) from Clostridium difficile 630 at 1.86 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Type 1 solute binding protein-like | 8091344 | 3000125 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | CD630_27010-like | 8047790 | 4005819 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Type 1 solute binding protein-like | 8091344 | 3000125 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | CagX | e3qi7B1 | A: alpha bundles | X: DEATH domain | H: HTH | T: winged helix domain | F: CagX | ECOD (develop294) |
| A | DUF3798 | e3qi7A1 | A: alpha bundles | X: Rossmann-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF3798 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.11400 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
| B | 3.40.50.11390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
| B | 3.30.30.130 | Alpha Beta | 2-Layer Sandwich | Defensin A-like | CATH (4.3.0) | |
| A | 3.40.50.11400 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
| A | 3.40.50.11390 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
| A | 3.30.30.130 | Alpha Beta | 2-Layer Sandwich | Defensin A-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF12683 | Protein of unknown function (DUF3798) (DUF3798) | Protein of unknown function (DUF3798) | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR024258 | Protein of unknown function DUF3798 | Family | |
| IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily |
