Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Phosphate and 1-Deoxynojirimycin
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Glyco_transf_36 | e3qg0A2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Glyco_transf_36 | ECOD (1.6) |
| A | Glyco_hydro_65C_1 | e3qg0A3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: Glyco_hydro_65C_1 | ECOD (1.6) |
| A | Glyco_hydro_36 | e3qg0A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: Glyco_hydro_36 | ECOD (1.6) |
| B | Glyco_transf_36 | e3qg0B2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Glyco_transf_36 | ECOD (1.6) |
| B | Glyco_hydro_65C_1 | e3qg0B3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: Glyco_hydro_65C_1 | ECOD (1.6) |
| B | Glyco_hydro_36 | e3qg0B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: Glyco_hydro_36 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.70.98.40 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
| A | 1.20.890.20 | Mainly Alpha | Up-down Bundle | cAMP-dependent Protein Kinase, Chain A | mpn423 like domain | CATH (4.3.0) |
| A | 2.60.420.10 | Mainly Beta | Sandwich | Maltose phosphorylase, domain 3 | Maltose phosphorylase, domain 3 | CATH (4.3.0) |
| A | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
| B | 2.70.98.40 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
| B | 1.20.890.20 | Mainly Alpha | Up-down Bundle | cAMP-dependent Protein Kinase, Chain A | mpn423 like domain | CATH (4.3.0) |
| B | 2.60.420.10 | Mainly Beta | Sandwich | Maltose phosphorylase, domain 3 | Maltose phosphorylase, domain 3 | CATH (4.3.0) |
| B | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Cellobiose Phosphorylase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012341 | Six-hairpin glycosidase-like superfamily | Homologous Superfamily | |
| IPR052047 | Glycosyl Hydrolase 94 Enzymes | Family | |
| IPR010383 | Glycosyl hydrolase 94, supersandwich domain | Domain | |
| IPR037825 | Cellobiose phosphorylase, N-terminal | Domain | |
| IPR008928 | Six-hairpin glycosidase superfamily | Homologous Superfamily | |
| IPR033432 | Glycosyl hydrolase 94, catalytic domain | Domain | |
| IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily | |
| IPR037018 | Glycoside hydrolase family 65, N-terminal domain | Homologous Superfamily |
