In silico and in vitro co-evolution of a high affinity complementary protein-protein interface
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d3q9nd_ | Alpha and beta proteins (a+b) | beta-hairpin-alpha-hairpin repeat | Ankyrin repeat | Ankyrin repeat | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| C | d3q9nc_ | Alpha and beta proteins (a+b) | beta-hairpin-alpha-hairpin repeat | Ankyrin repeat | Ankyrin repeat | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| B | d3q9nb_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | CoA-binding domain | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| A | d3q9na_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | CoA-binding domain | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | SurA_N | e3q9nD1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: SurA_N | ECOD (v294.1) |
| C | Tautomerase, Tautomerase_2 | e3q9nC1 | A: a/b three-layered sandwiches | X: Glucose permease domain IIB-like | H: eIF1-like | T: eIF1-like | F: Tautomerase, Tautomerase_2 | ECOD (v294.1) |
| B | SurA_N | e3q9nB1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: SurA_N | ECOD (v294.1) |
| A | SurA_N | e3q9nA1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: SurA_N | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
| C | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
| B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
