3PXV | pdb_00003pxv

Crystal structure of a Nitroreductase with bound FMN (Dhaf_2018) from Desulfitobacterium hafniense DCB-2 at 2.30 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3pxvd1 Alpha and beta proteins (a+b) FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like automated matches automated matches (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)
Dd3pxvd2 Artifacts Tags Tags Tags N-terminal Tags (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)
Cd3pxvc_ Alpha and beta proteins (a+b) FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like automated matches automated matches (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)
Bd3pxvb1 Alpha and beta proteins (a+b) FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like automated matches automated matches (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)
Bd3pxvb2 Artifacts Tags Tags Tags N-terminal Tags (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)
Ad3pxva_ Alpha and beta proteins (a+b) FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like automated matches automated matches (Desulfitobacterium hafniense DCB-2 ) [TaxId: 272564 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyFMN-dependent nitroreductase-like 8097330 3001947 SCOP2B (2022-06-29)
CSCOP2 FamilyNADH oxidase/flavin reductase 8097329 4001599 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyFMN-dependent nitroreductase-like 8097330 3001947 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyFMN-dependent nitroreductase-like 8097330 3001947 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFMN-dependent nitroreductase-like 8097330 3001947 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DGal-bind_lectine3pxvD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Gal-bind_lectinECOD (v294.1)
CGal-bind_lectine3pxvC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Gal-bind_lectinECOD (v294.1)
BGal-bind_lectine3pxvB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Gal-bind_lectinECOD (v294.1)
AIL15e3pxvA1 A: a/b three-layered sandwichesX: N-terminal beta-sandwich domain in anthrax protective antigenH: Macro domain-likeT: Macro domain-likeF: IL15ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.109.10 Alpha Beta 3-Layer(aba) Sandwich NADH Oxidase NADH OxidaseCATH (4.3.0)
C3.40.109.10 Alpha Beta 3-Layer(aba) Sandwich NADH Oxidase NADH OxidaseCATH (4.3.0)
B3.40.109.10 Alpha Beta 3-Layer(aba) Sandwich NADH Oxidase NADH OxidaseCATH (4.3.0)
A3.40.109.10 Alpha Beta 3-Layer(aba) Sandwich NADH Oxidase NADH OxidaseCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Nitroreductase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR029479NitroreductaseDomain
A, B, C, D
IPR000415Nitroreductase-likeHomologous Superfamily