3PVL
Structure of myosin VIIa MyTH4-FERM-SH3 in complex with the CEN1 of Sans
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | MyTH4 domain-like | 8048249 | 4006026 | SCOP2 (2022-06-29) |
A | SCOP2 Family | FERM domain-like | 8091833 | 4000747 | SCOP2 (2022-06-29) |
A | SCOP2 Family | SH3-domain | 8091839 | 4000369 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MyTH4 domain-like | 8091832 | 3002546 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PH domain-like | 8091836 | 3000134 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | SH3-domain | 8091841 | 3000153 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ubiquitin-like | 8091834 | 3000157 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FERM central domain-like | 8091835 | 3001227 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FERM_C1_MyoVII | e3pvlA4 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: FERM_C1_MyoVII | ECOD (1.6) |
A | SH3_1 | e3pvlA5 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1 | ECOD (1.6) |
A | FERM_M | e3pvlA3 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
A | MyTH4 | e3pvlA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: MyTH4 | ECOD (1.6) |
A | RA_2 | e3pvlA2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RA_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.530 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | MyTH4 domain | CATH (4.3.0) |
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
A | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21989 | RA like domain (RA_2) | RA like domain | - | Domain | |
PF00784 | MyTH4 domain (MyTH4) | MyTH4 domain | - | Family | |
PF21998 | Myosin-X FERM PH domain-like (FERM_C1_MyoVII) | Myosin-X FERM PH domain-like | This is the C-terminal PH domain of myosin-X FERM domain [1]. FERM domain has a stable arrangement of 3 domains: N-terminal domains - ubiquitin-like, Middle domain - Acyl-CoA binding protein-like and C-terminal domain - PH domain-like. | Domain | |