3P94

Crystal structure of a GDSL-like Lipase (BDI_0976) from Parabacteroides distasonis ATCC 8503 at 1.93 A resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3p94a1 Alpha and beta proteins (a/b) Flavodoxin-like SGNH hydrolase automated matches automated matches (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)
Ad3p94a2 Artifacts Tags Tags Tags N-terminal Tags (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)
Bd3p94b1 Alpha and beta proteins (a/b) Flavodoxin-like SGNH hydrolase automated matches automated matches (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)
Bd3p94b2 Artifacts Tags Tags Tags N-terminal Tags (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)
Cd3p94c_ Alpha and beta proteins (a/b) Flavodoxin-like SGNH hydrolase automated matches automated matches (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)
Dd3p94d_ Alpha and beta proteins (a/b) Flavodoxin-like SGNH hydrolase automated matches automated matches (Parabacteroides distasonis ATCC 8503 ) [TaxId: 435591 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF13472e3p94A1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: SGNH hydrolase (From Topology)T: SGNH hydrolaseF: PF13472ECOD (1.6)
BPF13472e3p94B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: SGNH hydrolase (From Topology)T: SGNH hydrolaseF: PF13472ECOD (1.6)
CPF13472e3p94C1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: SGNH hydrolase (From Topology)T: SGNH hydrolaseF: PF13472ECOD (1.6)
DPF13472e3p94D1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: SGNH hydrolase (From Topology)T: SGNH hydrolaseF: PF13472ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.1110 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SGNH hydrolaseCATH (4.3.0)
B3.40.50.1110 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SGNH hydrolaseCATH (4.3.0)
C3.40.50.1110 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SGNH hydrolaseCATH (4.3.0)
D3.40.50.1110 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold SGNH hydrolaseCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13472GDSL-like Lipase/Acylhydrolase family (Lipase_GDSL_2)GDSL-like Lipase/Acylhydrolase familyThis family of presumed lipases and related enzymes are similar to Pfam:PF00657.Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR013830SGNH hydrolase-type esterase domainDomain
A, B, C, D
IPR036514SGNH hydrolase superfamilyHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D
OPMMonotopic/peripheralAlpha/Beta monotopic/peripheralSGNH hydrolase superfamilyGDSL-like lipase, family 2