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Crystal structure of S. cerevisiae Hbs1 protein (GDP-bound form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota External Resource: Annotation Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) B SCOP2B Superfamily EF-Tu post-G domain-like 8056493 3002024 SCOP2B (2022-06-29) B SCOP2B Superfamily Ras-like P-loop GTPases 8056491 3002022 SCOP2B (2022-06-29) B SCOP2B Superfamily EF-Tu post-G domain-like 8056492 3002024 SCOP2B (2022-06-29) A SCOP2B Superfamily Ras-like P-loop GTPases 8056491 3002022 SCOP2B (2022-06-29) A SCOP2B Superfamily EF-Tu post-G domain-like 8056493 3002024 SCOP2B (2022-06-29) A SCOP2B Superfamily EF-Tu post-G domain-like 8056492 3002024 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) B GTP_EFTU_D2_1 e3p27B2 A: beta barrels X: cradle loop barrel H: RIFT-related T: Alanine racemase-C F: GTP_EFTU_D2_1 ECOD (1.6) B GTP_EFTU_D3_1 e3p27B6 A: beta barrels X: cradle loop barrel H: RIFT-related T: Aminomethyltransferase beta-barrel domain F: GTP_EFTU_D3_1 ECOD (1.6) B MnmE_helical_2nd e3p27B1 A: a/b three-layered sandwiches X: P-loop domains-like H: P-loop domains-related T: P-loop containing nucleoside triphosphate hydrolases F: MnmE_helical_2nd ECOD (1.6) A GTP_EFTU_D2_1 e3p27A5 A: beta barrels X: cradle loop barrel H: RIFT-related T: Alanine racemase-C F: GTP_EFTU_D2_1 ECOD (1.6) A GTP_EFTU_D3_1 e3p27A2 A: beta barrels X: cradle loop barrel H: RIFT-related T: Aminomethyltransferase beta-barrel domain F: GTP_EFTU_D3_1 ECOD (1.6) A MnmE_helical_2nd e3p27A6 A: a/b three-layered sandwiches X: P-loop domains-like H: P-loop domains-related T: P-loop containing nucleoside triphosphate hydrolases F: MnmE_helical_2nd ECOD (1.6)
Chains Accession Name Description Comments Source PF00009 Elongation factor Tu GTP binding domain (GTP_EFTU) Elongation factor Tu GTP binding domain This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Domain PF22594 GTP-eEF1A C-terminal domain-like (GTP-eEF1A_C) GTP-eEF1A C-terminal domain-like This entry represents a beta-barrel domain that is found C-terminal in homologues of elongation factor eEF1A. Domain
Chains Polymer Molecular Function Biological Process Cellular Component Elongation factor 1 alpha-like protein