Structure of profragilysin-3 from Bacteroides fragilis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Gal-bind_lectin | e3p24D1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Gal-bind_lectin | ECOD (v294.1) |
| C | Gal-bind_lectin | e3p24C1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Gal-bind_lectin | ECOD (v294.1) |
| B | Gal-bind_lectin | e3p24B1 | A: a/b three-layered sandwiches | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Gal-bind_lectin | ECOD (v294.1) |
| A | fragilysinNterm | e3p24A1 | A: a/b three-layered sandwiches | X: Spectrin repeat-like | H: Metalloproteases (zincins) catalytic domain | T: Metalloproteases (zincins) catalytic domain | F: fragilysinNterm | ECOD (v294.1) |
| A | Reprolysin_5 | e3p24A2 | A: a/b three-layered sandwiches | X: Spectrin repeat-like | H: Metalloproteases (zincins) catalytic domain | T: Metalloproteases (zincins) catalytic domain | F: Reprolysin_5 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.40.128.470 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| D | 3.40.390.10 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Collagenase (Catalytic Domain) | CATH (4.3.0) |
| C | 2.40.128.470 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| C | 3.40.390.10 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Collagenase (Catalytic Domain) | CATH (4.3.0) |
| B | 2.40.128.470 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| B | 3.40.390.10 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Collagenase (Catalytic Domain) | CATH (4.3.0) |
| A | 2.40.128.470 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
| A | 3.40.390.10 | Alpha Beta | 3-Layer(aba) Sandwich | Collagenase (Catalytic Domain) | Collagenase (Catalytic Domain) | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| BFT-3 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038176 | Fragilysin, N-terminal domain superfamily | Homologous Superfamily | |
| IPR006026 | Peptidase, metallopeptidase | Domain | |
| IPR024079 | Metallopeptidase, catalytic domain superfamily | Homologous Superfamily | |
| IPR032273 | Fragilysin, N-terminal | Domain | |
| IPR001843 | Fragilysin | Family |
