Annotations: 3OWG

Crystal structure of vaccinia virus Polyadenylate polymerase(vp55)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3owgb_	Multi-domain proteins (alpha and beta)	Poly(A) polymerase catalytic subunit-like	Poly(A) polymerase catalytic subunit-like	Poxvirus poly(A) polymerase catalytic subunit-like	automated matches	VACV (Vaccinia virus WR ) [TaxId: 10254 ],	SCOPe (2.08)
A	d3owga_	Multi-domain proteins (alpha and beta)	Poly(A) polymerase catalytic subunit-like	Poly(A) polymerase catalytic subunit-like	Poxvirus poly(A) polymerase catalytic subunit-like	automated matches	VACV (Vaccinia virus WR ) [TaxId: 10254 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Poxvirus poly(A) polymerase N-terminal domain-like	8055708	3002298	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Poly(A) polymerase C-terminal domain-like	8032899	3001629	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Nucleotidyltransferase-like	8055710	3000129	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Poxvirus poly(A) polymerase N-terminal domain-like	8055708	3002298	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Poly(A) polymerase C-terminal domain-like	8032899	3001629	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nucleotidyltransferase-like	8055710	3000129	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	EB1	e3owgB4	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: EB1	ECOD (v294.1)
A	Pox_polyA_pol_N	e3owgA4	A: a/b three-layered sandwiches	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Pox_polyA_pol_N	ECOD (v294.1)
A	GlnD_UR_UTase	e3owgA5	A: a/b three-layered sandwiches	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: GlnD_UR_UTase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.1270.320	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)
B	3.30.460.60	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)
A	1.20.1270.320	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak	Chain:A	CATH (4.3.0)
A	3.30.460.60	Alpha Beta	2-Layer Sandwich	Beta Polymerase	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03296	Poxvirus poly(A) polymerase nucleotidyltransferase domain (Pox_polyA_pol)	Poxvirus poly(A) polymerase nucleotidyltransferase domain		Domain
A, B	PF12629	Poxvirus poly(A) polymerase C-terminal domain (Pox_polyA_pol_C)	Poxvirus poly(A) polymerase C-terminal domain	This domain is found at the C-terminus of the pox virus PolyA polymerase protein [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Poly(A) polymerase catalytic subunit	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding poly(A) RNA polymerase activity adenylyltransferase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups cation binding metal ion binding	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA processing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA processing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process RNA processing	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR038337	Poxvirus poly(A) polymerase, catalytic subunit, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR024397	Poxvirus poly(A) polymerase, catalytic subunit, C-terminal	Domain
A, B	IPR004976	Poly(A) polymerase catalytic subunit, Poxvirus	Family
A, B	IPR038419	Poly(A) polymerase, nucleotidyltransferase domain superfamily, Poxvirus	Homologous Superfamily
A, B	IPR024231	Poly(A) polymerase, nucleotidyltransferase domain, Poxvirus	Domain
A, B	IPR037265	Poly(A) polymerase catalytic subunit superfamily	Homologous Superfamily
A, B	IPR024398	Poxvirus poly(A) polymerase, catalytic subunit, N-terminal	Domain

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