3ORH | pdb_00003orh

Human guanidinoacetate N-methyltransferase with SAH

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3orha_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Guanidinoacetate methyltransferase	Guanidinoacetate methyltransferase	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d3orhb_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Guanidinoacetate methyltransferase	Guanidinoacetate methyltransferase	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d3orhc_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Guanidinoacetate methyltransferase	Guanidinoacetate methyltransferase	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
D	d3orhd_	Alpha and beta proteins (a/b)	S-adenosyl-L-methionine-dependent methyltransferases	S-adenosyl-L-methionine-dependent methyltransferases	Guanidinoacetate methyltransferase	Guanidinoacetate methyltransferase	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Guanidinoacetate methyltransferase	8023967	4003309	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8036346	3000118	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8036346	3000118	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8036346	3000118	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	S-adenosyl-L-methionine-dependent methyltransferases	8036346	3000118	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Hexapep	e3orhB1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: Hexapep	ECOD (v294.1)
C	Hexapep	e3orhC1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: Hexapep	ECOD (v294.1)
D	Hexapep	e3orhD1	A: a/b three-layered sandwiches	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: Hexapep	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
B	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
C	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
D	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Guanidinoacetate N-methyltransferase	transferase activity, transferring one-carbon groups transferase activity guanidinoacetate N-methyltransferase activity methyltransferase activity S-adenosylmethionine-dependent methyltransferase activity catalytic activity	developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation creatine metabolic process oxoacid metabolic process modified amino acid metabolic process carboxylic acid metabolic process metabolic process cellular process developmental process spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation creatine metabolic process oxoacid metabolic process modified amino acid metabolic process carboxylic acid metabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process organic acid metabolic process anatomical structure morphogenesis anatomical structure development animal organ development animal organ morphogenesis methylation multicellular organismal process system process muscle contraction muscle system process monocarboxylic acid biosynthetic process small molecule biosynthetic process creatine biosynthetic process modified amino acid biosynthetic process organic acid biosynthetic process carboxylic acid biosynthetic process biosynthetic process regulation of multicellular organism growth regulation of biological process regulation of growth regulation of developmental growth regulation of developmental process developmental growth growth biological regulation multicellular organism growth regulation of multicellular organismal process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A, B, C, D	IPR051038	RMT2/GAMT Methyltransferase	Family
A, B, C, D	IPR026480	Arginine N-methyltransferase 2-like domain	Domain
A, B, C, D	IPR016550	Guanidinoacetate N-methyltransferase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q14353	guanidinoacetate methyltransferase deficiency intellectual disability visual epilepsy malignant pancreatic neoplasm Mental Retardation, Psychosocial pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis dermatomyositis inborn errors of metabolism medulloblastoma pancreatic intraductal papillary-mucinous carcinoma AGAT deficiency pituitary cancer Duchenne muscular dystrophy guanidinoacetate methyltransferase deficiency intellectual disability visual epilepsy malignant pancreatic neoplasm Mental Retardation, Psychosocial pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis dermatomyositis inborn errors of metabolism medulloblastoma pancreatic intraductal papillary-mucinous carcinoma AGAT deficiency pituitary cancer Duchenne muscular dystrophy inherited amino acid metabolic disorder juvenile dermatomyositis osteosarcoma pancreatic intraductal papillary-mucinous neoplasm creatine transporter deficiency spina bifida

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.