3OBI
Crystal structure of a formyltetrahydrofolate deformylase (NP_949368) from RHODOPSEUDOMONAS PALUSTRIS CGA009 at 1.95 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | ACT_6 | e3obiB1 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_6 | ECOD (1.6) |
B | Formyl_trans_N | e3obiB2 | A: a/b three-layered sandwiches | X: Formyltransferase (From Topology) | H: Formyltransferase (From Topology) | T: Formyltransferase | F: Formyl_trans_N | ECOD (1.6) |
C | ACT_6 | e3obiC1 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_6 | ECOD (1.6) |
C | Formyl_trans_N | e3obiC2 | A: a/b three-layered sandwiches | X: Formyltransferase (From Topology) | H: Formyltransferase (From Topology) | T: Formyltransferase | F: Formyl_trans_N | ECOD (1.6) |
D | ACT_6 | e3obiD1 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_6 | ECOD (1.6) |
D | Formyl_trans_N | e3obiD2 | A: a/b three-layered sandwiches | X: Formyltransferase (From Topology) | H: Formyltransferase (From Topology) | T: Formyltransferase | F: Formyl_trans_N | ECOD (1.6) |
A | ACT_6 | e3obiA2 | A: a+b two layers | X: Alpha-beta plaits | H: ACT-like (From Topology) | T: ACT-like | F: ACT_6 | ECOD (1.6) |
A | Formyl_trans_N | e3obiA1 | A: a/b three-layered sandwiches | X: Formyltransferase (From Topology) | H: Formyltransferase (From Topology) | T: Formyltransferase | F: Formyl_trans_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.30.70.260 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | ACT domain | CATH (4.3.0) |
B | 3.40.50.170 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Formyl transferase, N-terminal domain | CATH (4.3.0) |
C | 3.30.70.260 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | ACT domain | CATH (4.3.0) |
C | 3.40.50.170 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Formyl transferase, N-terminal domain | CATH (4.3.0) |
D | 3.30.70.260 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | ACT domain | CATH (4.3.0) |
D | 3.40.50.170 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Formyl transferase, N-terminal domain | CATH (4.3.0) |
A | 3.30.70.260 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | ACT domain | CATH (4.3.0) |
A | 3.40.50.170 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Formyl transferase, N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00551 | Formyl transferase (Formyl_trans_N) | Formyl transferase | This family includes the following members. Glycinamide ribonucleotide transformylase catalyses the third step in de novo purine biosynthesis, the transfer of a formyl group to 5'-phosphoribosylglycinamide. Formyltetrahydrofolate deformylase produces ... | Domain | |
PF01842 | ACT domain (ACT) | ACT domain | This family of domains generally have a regulatory role. ACT domains are linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulati ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041729 | Formyltetrahydrofolate deformylase, C-terminal hydrolase domain | Domain | |
IPR044074 | Formyltetrahydrofolate deformylase, ACT domain | Domain | |
IPR002376 | Formyl transferase, N-terminal | Domain | |
IPR045865 | ACT-like domain | Homologous Superfamily | |
IPR002912 | ACT domain | Domain | |
IPR036477 | Formyl transferase, N-terminal domain superfamily | Homologous Superfamily | |
IPR004810 | Formyltetrahydrofolate deformylase | Family |