3O72 | pdb_00003o72

Crystal structure of EfeB in complex with heme


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHhH-GPDe3o72A3 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: HhH-GPDECOD (v294.1)
BHhH-GPDe3o72B3 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: HhH-GPDECOD (v294.1)
CCBSe3o72C1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: ClpP/crotonaseT: ClpP/crotonaseF: CBSECOD (v294.1)
DCBSe3o72D1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: ClpP/crotonaseT: ClpP/crotonaseF: CBSECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF04261Dyp-type peroxidase, N-terminal (Dyp_perox_N)Dyp-type peroxidase, N-terminalDyp-type (dye-decolorizing) peroxidases are a family of heme proteins found in a wide range of bacteria and fungi [1,2]. They have a wide substrate specificity and lack homology to most other peroxidases, with the ability to function well under much ...Dyp-type (dye-decolorizing) peroxidases are a family of heme proteins found in a wide range of bacteria and fungi [1,2]. They have a wide substrate specificity and lack homology to most other peroxidases, with the ability to function well under much lower pH conditions compared with the other plant peroxidases [2,3,4]. They consist of two domains that adopt a ferredoxin-like fold [2,4], connected by a loop. This entry represents the N-terminal domain [2,3,4].
Domain
A, B, C, D
PF20628Dyp-type peroxidase, C-terminal (Dyp_perox_C)Dyp-type peroxidase, C-terminalDyp-type (dye-decolorizing) peroxidases are a family of heme proteins found in a wide range of bacteria and fungi [1,2]. They have a wide substrate specificity and lack homology to most other peroxidases, with the ability to function well under much ...Dyp-type (dye-decolorizing) peroxidases are a family of heme proteins found in a wide range of bacteria and fungi [1,2]. They have a wide substrate specificity and lack homology to most other peroxidases, with the ability to function well under much lower pH conditions compared with the other plant peroxidases [2,3,4]. They consist of two domains that adopt a ferredoxin-like fold [2,4], connected by a loop. This entry represents the C-terminal domain, which possess a large hydrophobic cavity for heme binding [2,3,4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage