Annotations: 3O59

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth X]	PolC_DP2_1st	e3o59X1	A: a+b two layers	X: DNA polymerase D large subunit DP2 N-terminal domain (From Topology)	H: DNA polymerase D large subunit DP2 N-terminal domain (From Topology)	T: DNA polymerase D large subunit DP2 N-terminal domain	F: PolC_DP2_1st	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth X]	DNA polymerase II large subunit	catalytic activity, acting on DNA DNA-directed DNA polymerase activity DNA polymerase activity catalytic activity, acting on a nucleic acid transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups DNA binding binding nucleic acid binding DNA exonuclease activity 3'-5' exonuclease activity hydrolase activity catalytic activity, acting on DNA DNA-directed DNA polymerase activity DNA polymerase activity catalytic activity, acting on a nucleic acid transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups DNA binding binding nucleic acid binding DNA exonuclease activity 3'-5' exonuclease activity hydrolase activity DNA exonuclease activity, producing 5'-phosphomonoesters DNA nuclease activity single-stranded DNA exodeoxyribonuclease activity nuclease activity hydrolase activity, acting on ester bonds 3'-5'-DNA exonuclease activity exonuclease activity single-stranded DNA 3'-5' DNA exonuclease activity identical protein binding protein binding	catabolic process primary metabolic process DNA metabolic process nucleic acid metabolic process macromolecule catabolic process nucleobase-containing compound catabolic process nucleobase-containing compound metabolic process DNA catabolic process nucleic acid catabolic process metabolic process cellular process macromolecule metabolic process intein-mediated protein splicing gene expression catabolic process primary metabolic process DNA metabolic process nucleic acid metabolic process macromolecule catabolic process nucleobase-containing compound catabolic process nucleobase-containing compound metabolic process DNA catabolic process nucleic acid catabolic process metabolic process cellular process macromolecule metabolic process intein-mediated protein splicing gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis protein processing protein metabolic process protein splicing DNA-templated DNA replication DNA replication	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth X]	IPR016033	DNA polymerase II large subunit DP2, N-terminal	Domain
A [auth X]	IPR036844	Hint domain superfamily	Homologous Superfamily
A [auth X]	IPR030934	Intein C-terminal splicing region	Conserved Site
A [auth X]	IPR006141	Intein N-terminal splicing region	PTM
A [auth X]	IPR056171	DNA polymerase II large subunit DP2, central domain	Domain
A [auth X]	IPR056172	DNA polymerase II large subunit DP2, catalytic domain	Domain
A [auth X]	IPR003587	Hint domain N-terminal	Domain
A [auth X]	IPR004475	DNA polymerase II large subunit DP2	Family
A [auth X]	IPR003615	HNH nuclease	Domain
A [auth X]	IPR003586	Hint domain C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.