3O01 | pdb_00003o01

The Crystal Structure of the Salmonella Type III Secretion System Tip Protein SipD in Complex with Deoxycholate

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyIpaD-like 8078125 3001578 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyIpaD-like 8078125 3001578 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhospholip_A2_1e3o01A1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Phospholip_A2_1ECOD (v294.1)
BPhospholip_A2_1e3o01B1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Phospholip_A2_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1710.10 Mainly Alpha Up-down Bundle IpaD-like IpaD-likeCATH (4.3.0)
B1.20.1710.10 Mainly Alpha Up-down Bundle IpaD-like IpaD-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF06511Type III secretion systems tip complex components (T3SS_TC)Type III secretion systems tip complex components- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Cell invasion protein sipD- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR009483Type III secretion systems tip complex component IpaD/BipD/SipDFamily
A, B
IPR036708BipD-like superfamilyHomologous Superfamily