3NVQ | pdb_00003nvq

Molecular mechanism of guidance cue recognition

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth F]e3nvqF1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Be3nvqB2 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
C [auth E]e3nvqE1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
APSIe3nvqA1 A: a/b three-layered sandwichesX: Retrovirus capsid proteinH: Retrovirus capsid protein N-terminal domainT: Retrovirus capsid protein N-terminal domainF: PSIECOD (v294.1)
AMarR_2e3nvqA3 A: a/b three-layered sandwichesX: Retrovirus capsid proteinH: Retrovirus capsid protein N-terminal domainT: Retrovirus capsid protein N-terminal domainF: MarR_2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth E]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
C [auth E]3.30.1680.10 Alpha Beta 2-Layer Sandwich ligand-binding face of the semaphorins, domain 2 ligand-binding face of the semaphorins, domain 2CATH (4.3.0)
C [auth E]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
A3.30.1680.10 Alpha Beta 2-Layer Sandwich ligand-binding face of the semaphorins, domain 2 ligand-binding face of the semaphorins, domain 2CATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
D [auth F]		PF01437Plexin repeat (PSI)Plexin repeat- Family
A,
C [auth E]		PF01437Plexin repeat (PSI)Plexin repeat- Family
A,
C [auth E]		PF01403Sema domain (Sema)Sema domain- Repeat
A,
C [auth E]		PF13895Immunoglobulin domain (Ig_2)Immunoglobulin domainThis domain contains immunoglobulin-like domains. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
D [auth F]		Plexin-C1
A,
C [auth E]		Semaphorin-7A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B,
D [auth F]		IPR002909IPT domainDomain
B,
D [auth F]		IPR016201PSI domainDomain
B,
D [auth F]		IPR008936Rho GTPase activation proteinHomologous Superfamily
B,
D [auth F]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B,
D [auth F]		IPR002165Plexin repeatRepeat
B,
D [auth F]		IPR041853Plexin-C1, Sema domainDomain
B,
D [auth F]		IPR031148Plexin familyFamily
B,
D [auth F]		IPR046800Plexin, cytoplasmic RhoGTPase-binding domainDomain
B,
D [auth F]		IPR013783Immunoglobulin-like foldHomologous Superfamily
B,
D [auth F]		IPR013548Plexin, cytoplasmic RasGAP domainDomain
B,
D [auth F]		IPR036352Sema domain superfamilyHomologous Superfamily
B,
D [auth F]		IPR001627Sema domainDomain
A,
C [auth E]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A,
C [auth E]		IPR016201PSI domainDomain
A,
C [auth E]		IPR027231SemaphorinFamily
A,
C [auth E]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A,
C [auth E]		IPR002165Plexin repeatRepeat
A,
C [auth E]		IPR042824Semaphorin-7A, sema domainDomain
A,
C [auth E]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
C [auth E]		IPR036352Sema domain superfamilyHomologous Superfamily
A,
C [auth E]		IPR007110Immunoglobulin-like domainDomain
A,
C [auth E]		IPR001627Sema domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B,
D [auth F]		Pharos:  O60486
A,
C [auth E]		Pharos:  O75326