3NRT | pdb_00003nrt

The crystal structure of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e3nrtF1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F:	ECOD (develop294)
E		e3nrtE1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F:	ECOD (develop294)
D		e3nrtD1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F:	ECOD (develop294)
C		e3nrtC1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F:	ECOD (develop294)
B		e3nrtB1	A: alpha bundles	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F:	ECOD (develop294)
A	Trypsin,Thrombin_light	e3nrtA1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: Trypsin,Thrombin_light	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)
E	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)
D	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)
C	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)
B	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)
A	6.20.350.10	Special	Other non-globular	Actin	Chain A, domain 4	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF02026	RyR domain (RyR)	RyR domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Putative ryanodine receptor	cation binding ion binding binding metal ion binding small molecule binding	localization transport monoatomic ion transport monoatomic cation transport establishment of localization calcium ion transport metal ion transport	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR003032	Ryanodine receptor Ryr	Domain
A, B, C, D, E A, B, C, D, E, F	IPR015925	Ryanodine/Inositol 1,4,5-trisphosphate receptor	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.