3NRD | pdb_00003nrd

Crystal structure of a histidine triad (HIT) protein (SMc02904) from SINORHIZOBIUM MELILOTI 1021 at 2.06 A resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCytochrome_CBB3e3nrdD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Cytochrome_CBB3ECOD (v294.1)
CCytochrome_CBB3e3nrdC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Cytochrome_CBB3ECOD (v294.1)
BCytochrome_CBB3e3nrdB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Cytochrome_CBB3ECOD (v294.1)
APyr_redox_2e3nrdA1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Pyr_redox_2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-likeCATH (4.3.0)
C3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-likeCATH (4.3.0)
B3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-likeCATH (4.3.0)
A3.30.428.10 Alpha Beta 2-Layer Sandwich HIT family, subunit A HIT-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF01230HIT domain (HIT)HIT domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
histidine triad (HIT) protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR036265HIT-like superfamilyHomologous Superfamily
A, B, C, D
IPR011146HIT-like domainDomain