3NQI | pdb_00003nqi

Crystal structure of a Putative lipoprotein (BF3042) from Bacteroides fragilis NCTC 9343 at 1.87 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCTD of NigD-like 8052345 4005383 SCOP2 (2022-06-29)
ASCOP2 FamilyNTD of NigD-like 8052346 4005812 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCTD of NigD-like 8052348 3002106 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial enterotoxins 8052347 3000434 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyBacterial enterotoxins 8052347 3000434 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCTD of NigD-like 8052348 3002106 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCTD of NigD-like 8052348 3002106 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBacterial enterotoxins 8052347 3000434 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCTD of NigD-like 8052348 3002106 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyBacterial enterotoxins 8052347 3000434 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3nqiB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
BSdh_cyte3nqiB2 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Sdh_cytECOD (v294.1)
CSdh_cyte3nqiC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Sdh_cytECOD (v294.1)
DSdh_cyte3nqiD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Sdh_cytECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
A2.60.40.3220 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
B2.60.40.3220 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
C2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
C2.60.40.3220 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
D2.40.50.500 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) NigD-like N-terminal OB domainCATH (4.3.0)
D2.60.40.3220 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR038179NigD-like, N-terminal domain superfamilyHomologous Superfamily