3NET | pdb_00003net

Crystal structure of histidyl-tRNA synthetase from Nostoc sp. PCC 7120


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSH3_12e3netB1 A: a/b three-layered sandwichesX: YrdC/RibBH: SH3T: SH3F: SH3_12ECOD (v294.1)
AFtsJe3netA1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: FtsJECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
B3.40.50.800 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Anticodon-binding domainCATH (4.3.0)
A3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
A3.40.50.800 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Anticodon-binding domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13393Histidyl-tRNA synthetase (tRNA-synt_His)Histidyl-tRNA synthetaseThis is a family of class II aminoacyl-tRNA synthetase-like and ATP phosphoribosyltransferase regulatory subunits. Domain
A, B
PF03129Anticodon binding domain (HGTP_anticodon)Anticodon binding domainThis domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [1] it is probably the anticodon binding domain [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Histidyl-tRNA synthetase